Publications

In press (G = mentored graduate student, U = mentored undergraduate student)

Leach, T.H., B.E. Beisner, C.C. Carey, P. Pernica, K.C. Rose, Y. Huot, J.A. Brentrup, I. Domaizon, H.-P. Grossart, B.W. Ibelings, P.T. Kelly, S. Jacquet, J.A. Rusak, J.D. Stockwell, D. Straile, and P. Verburg. Patterns and drivers of deep chlorophyll maxima structure in 100 lakes: the relative importance of light and thermal stratification. In press at Limnology and Oceanography. DOI: 10.1002/lno.10656

HamreG, K.D., A.B. GerlingG, Z.W. MungerG, J.P. DoubekG, R.P. McClureG, K.L. Cottingham, and C.C. Carey. Spatial variation in dinoflagellate recruitment along a reservoir ecosystem continuum. In press at Journal of Plankton Research.

Subratie, K.G, S. Aditya, R. Figueiredo, C.C. Carey, and P. Hanson. GRAPLEr: A distributed collaborative environment for lake ecosystem modeling that integrates overlay networks, high-throughput computing, and web services. In press at Concurrency and Computation: Practice and Experience. DOI: 10.1002/cpe.4139

Klug, J.L., C.C. Carey, D.C. Richardson, and R.D. Gougis. Analysis of high-frequency and long-term data in undergraduate ecology classes improves quantitative literacy. In press at Ecosphere. DOI: 10.1002/ecs2.1733

Pauli, J.N., C.C. Carey, and M.Z. Peery. Green sloths and brown cows: the role of dominant mammalian herbivores in carbon emissions for tropical agro-ecosystems. In press at Mammal Review. DOI: 10.1111/mam.12086

Chen, S.G, C. Lei, C.C. Carey, P.A. Gantzer, and J.C. Little. A coupled three-dimensional hydrodynamic model for predicting hypolimnetic oxygenation and epilimnetic mixing in a shallow eutrophic reservoir. In press at Water Resources Research. DOI: 10.1002/2016WR019279

Doubek, J.P.G, and C.C. Carey. Catchment, morphometric, and water quality characteristics differ between reservoirs and naturally formed lakes on a latitudinal gradient in the continental United States. In press at Inland Waters. DOI: 10.1080/20442041.2017.1293317

Gougis, R.D., J.F. StrombergG, A. O’Hare, N.E. Bader, T. Meixner, C.M. O’Reilly, and C.C. Carey. Post-secondary science students’ explanations of randomness and variation and implications for science learning. In press at International Journal of Science and Mathematics Education. DOI: 10.1007/s10763-016-9737-7

Richardson, D.C., C.C. Carey, D.A. Bruesewitz, and K.C. Weathers. Intra- and inter-annual variability in metabolism in an oligotrophic lake. In press at Aquatic Sciences. DOI: 10.1007/s00027-016-0499-7

2017

Carey, C.C., B.L. Brown, and K.L. Cottingham. Cyanobacterial blooms increase the stability and network complexity of phytoplankton communities. Ecosphere. 8(7):e01830. DOI: 10.1002/ecs2.1830 <Carey_et_al-2017-Ecosphere>

Carey, C.C. and R.D. Gougis. Simulation modeling of lakes in undergraduate and graduate classrooms increases comprehension of climate change concepts and experience with computational tools.  Journal of Science Education and Technology. 26: 1-11. DOI: 10.1007/s10956-016-9644-2 <Carey&Gougis_2017_JSciEducTech>

Hampton, S.E., A.W.E. Galloway, S.M. Powers, T. Ozersky, K.H. Woo, R.D. Batt, S.G. Laboo, C.M. O’Reilly, S. Sharma, N.R. Lottig, E.H. Stanley, R.L. North, J.D. Stockwell, R. Adrian, G.A. Weyhenmeyer, L. Arvola, H.M. Baulch, I. Bertani, L.L. Bowman, C.C. Carey, J. Catalan, W. Colom-Montero, L.M. Domine, M. Felip, I. Granados, C. Gries, H.-P. Grossart, J. Haberman, M. Haldna, B. Hayden, S.N. Higgins, J.C. Jolly, K.K. Kahilainen, E. Kaup, M.J. Kehoe, S. MacIntyre, A.W. Mackay, H.L. Mariash, R. M. McKay, B. Nixdorf, P. Noges, T. Noges, M. Palmer, D.C. Pierson, D.M. Post, M.J. Pruett, M. Rautio, J.S. Read, S.L. Roberts, J. Rucker, S. Sadro, E.A. Silow, D.E. Smith, R.W. Sterner, G.E.A. Swann, M.A. Timofeyev, M. Toro, M.R. Twiss, R.G. Vogt, S.B. Watson, E.J. Whiteford, and M.A. Xenopoulos. Ecology under lake ice. Ecology Letters. 20: 98-111. DOI: 10.1111/ele.12699 <Hampton_et_al-2017-Ecology_Letters>

Snortheim, C.A.G, P.C. Hanson, K.D. McMahon, J.S. Read, C.C. Carey, and H.A. Dugan. Meteorological drivers of hypolimnetic anoxia in a eutrophic, north temperate lake. Ecological Modelling. 343: 39-53. DOI: 10.1016/j.ecolmodel.2016.10.014 <Snortheim_etal_2017_EcolModelling>

2016

Munger, Z.W.G, C.C. Carey, A.B. GerlingG, K.D. HamreG, J.P. DoubekG, S.D. KlepatzkiU, R.P. McClureG, and M.E. Schreiber. Effectiveness of hypolimnetic oxygenation for preventing accumulation of Fe and Mn in a drinking water reservoir. Water Research. 106: 1-14. DOI: 10.1016/j.watres.2016.09.038. <Munger_etal_2016_WaterRes>

Birgand, F., K. Aveni-Deforge, B. Smith, M. Horstman, B. MaxwellG, A.B. GerlingG, and C.C. Carey. First report of a novel multiplexer pumping system coupled to a water quality probe to collect high temporal frequency in situ water chemistry measurements at multiple sites. Limnology and Oceanography: Methods. 14: 767-783. DOI: 10.1002/lom3.10122. <Birgand_et_al_2016_Limnology_and_Oceanography_Methods>

Gerling, A.B.G, Z.W. MungerG, J.P. DoubekG, K.D. HamreG, P.A. Gantzer, J.C. Little, and C.C. Carey. Whole-catchment manipulations of internal and external loading reveal the sensitivity of a century-old reservoir to hypoxia. Ecosystems. 19:555-571. DOI: 10.1007/s10021-015-9951-0 <Gerling_etal_2016>

Carey, C.C., P.C. Hanson, R.C. Lathrop, and A.L. St. Amand. Using wavelet analyses to examine variability in phytoplankton seasonal succession and annual periodicity. Journal of Plankton Research. 38:27-40. DOI: 10.1093/plankt/fbv116 <Carey_etal._2016_JPR>

Little, J.C., E. Hester, and C.C. Carey. Assessing and enhancing environmental sustainability – a conceptual review. Environmental Science & Technology. 50: 6830-6845. DOI: 10.1021/acs.est.6b00298 <Little et al 2016 EST>

ChenG, S. C. Lei, C.C. Carey and J.C. Little. Modelling the effect of artificial mixing on thermal stability and substance transport in a drinking-water reservoir using a 3D hydrodynamic model. Proceedings of the 20th Australasian Fluid Mechanics Conference. Perth, Australia, 5-8 December 2016. <Chen_etal_2016_FluidMechanics>

Beisner, B.E. and C.C. Carey. Lake name or name lake? The etymology of lake nomenclature in the United States. Freshwater Biology. 61: 1601-1609. DOI: 10.1111/fwb.12795. <Beisner&Carey_2016_Freshwater_Biology>

ChenG, S., C. Lei, C.C. Carey and J.C. Little. Predicting the performance of an epilimnetic bubble-plume mixer in a shallow reservoir using a three-dimensional hydrodynamic model. Proceedings of the Australasian Heat and Mass Transfer Conference. Brisbane, Australia, July 2016. <Chen_etal_2016_AHMT>

Carey, C.C., and K.L. Cottingham. Cross-scale perspectives: Integrating long-term and high-frequency data into our understanding of communities and ecosystems. Bulletin of the Ecological Society of America. 97:129-132. DOI: 10.1002/bes2.1205 <Carey&Cottingham_2016_ESABulletin>

2015

Hipsey, M.R., D.P. Hamilton, P.C. Hanson, C.C. Carey, J.Z. Coletti, J.S. Read, B.W. Ibelings, F. Valesini, and J.D. Brookes. Predicting the resilience and recovery of aquatic systems: a framework for model evolution within environmental observatories. Water Resources Research. 51:7023-7043. DOI: 10.1002/2015WR017175 <Hipsey_etal._2015_Water_Resources_Research>

Doubek, J.P.G, C.C. Carey, and B.J. Cardinale. Anthropogenic land use is associated with N-fixing cyanobacterial dominance in lakes across the continental United States. Aquatic Sciences. 77:681-694. DOI 10.1007/s00027-015-0411-x <Doubek_etal_2015_AquaticSci>

Bruesewitz, D.A., C.C. Carey, D.C. Richardson, and K.C. Weathers. Under-ice thermal stratification dynamics of a large, deep lake revealed by high-frequency data. Limnology & Oceanography. 60:347-359. DOI: 10.1002/lno.10014 <Bruesewitz_etal._2015>

Carey, C.C., R.D. Gougis, J.L. Klug, C.M. O’Reilly, and D.C. Richardson. A model for using environmental data-driven inquiry and exploration to teach limnology to undergraduates. Limnology & Oceanography Bulletin. 24:32-35. DOI: 10.1002/lob.10020 <Carey_et_al_LOB_2015>

Brookes, J.D., and C.C. Carey. Goal 6: Ensure availability and sustainable management of water and sanitation for all. United Nations Chronicle. 51(4):15-16. <Brookes_&_Carey_2015>

Sokol, E.R., B.L. Brown, C.C. Carey, B. TornwallG, C.M. Swan, and J.E. Barrett. Linking management to biodiversity in built ponds using metacommunity simulations. Ecological Modelling. 296:36-45. DOI:10.1016/j.ecolmodel.2014.10.022 <Sokol_et_al_2015>

Hansen, G.J.A.*, and C.C. Carey*. Fish and phytoplankton exhibit contrasting temporal species abundance patterns in a dynamic north temperate lake. PLOS One. 10(2): e0115414 DOI: 10.1371/journal.pone.0115414  <Hansen&Carey_PLOSOne_2015> *Both authors contributed equally to this work.

Cottingham, K.L., H.A. Ewing, M. Greer, C.C. Carey, and K.C. Weathers.  2015. Cyanobacteria as biological drivers of lake nitrogen and phosphorus cycling.  Ecosphere. 6(1):1 DOI: 10.1890/ES14-00174.1 <Cottingham et al 2015 Ecosphere>

2014

Gerling, A.B.G, Browne, R.G.G, Gantzer, P.A., Mobley, M.H., Little, J.C., and C.C. Carey. 2014. First report of the successful operation of a side stream supersaturation hypolimnetic oxygenation system in a eutrophic, shallow reservoir.  Water Research. 67: 129-143. doi: 10.1016/j.watres.2014.09.002 <Gerling_etal_2014_WR>

Carey, C.C., K.L. Cottingham, N.G. Hairston, Jr., and K.C. Weathers.  2014. Trophic state mediates the effects of a large, colonial cyanobacterium on phytoplankton dynamics.  Fundamental and Applied Limnology. 184: 247-260. DOI: 10.1127/1863-9135/2014/0492 <Carey et al 2014 FAL>

Carey, C.C., K.C. Weathers, H.A. Ewing, M.L. Greer, and K.L. Cottingham. 2014. Spatial and temporal variability in recruitment of the cyanobacterium Gloeotrichia echinulata in an oligotrophic lake.  Freshwater Science.  33: 577-592. DOI: 10.1086/675734  *Chosen as the Featured Article of the issue <Carey_et_al_2014_FWS>

Carey, C.C., K.L. Cottingham, K.C. Weathers, J.A. BrentrupU, N.M. RuppertsbergerU, H.A. Ewing, and N.G. Hairston, Jr.  Facilitation in an oligotrophic lake: the cyanobacterium Gloeotrichia echinulata stimulates phytoplankton biomass, richness, and diversity.  2014. Journal of Plankton Research. 36:364-377. doi: 10.1093/plankt/fbt105  <Carey_etal_J. Plankton Res_2014>  *Cover article of the issue

Hamilton, D.P., C.C. Carey, L. Arvola, P. Arzberger, C. Brewer, J.J. Cole, E. Gaiser, P.C. Hanson, B.W. Ibelings, E. Jennings, T.K. Kratz, F.-P. Lin, C.G. McBride, D. de Motta Marques, K. Muraoka, A. Nishri, B. Qin, J.S. Read, K.C. Rose, E. Ryder, K.C. Weathers, G. Zhu, D. Trolle, and J.D. Brookes. 2014. A Global Lake Ecological Observatory Network (GLEON) for synthesising high-frequency sensor data for validation of deterministic ecological models. Inland Waters. 5: 49-56. DOI: 10.5268/IW-5.1.566 <Hamilton_etal_IW_2014>

Brookes, J.D., C.C. Carey, D.P. Hamilton, L. Ho, L. van der Linden, R. Renner, and A. Rigosi. 2014. Emerging challenges for the drinking water industry. Environmental Science & Technology. 48:2099-2101.  DOI: 10.1021/es405606t <Brookes_et_al_2014_ES&T>

Rigosi, A., C.C. Carey, B.W. Ibelings, and J.D. Brookes. 2014. The interaction between climate warming and eutrophication to promote cyanobacteria is dependent on trophic state and varies among taxa. Limnology and Oceanography.  59:99-114. DOI: 10.4319/lo.2014.59.01.0099 <Rigosi_etal_2014_L&O>

Pauli, J.N., J.E. Mendoza, S.A. Steffan, C.C. Carey, P.J. Weimer, and M.Z. Peery.  2014. A syndrome of mutualism reinforces the life history of a sloth.  Proceedings of the Royal Society B.  281: 20133006. DOI: 10.1098/rspb.2013.3006 <Proc. R. Soc. B_Pauli_etal_2014

Baustian, M.M., Hansen, G.J.A., de Kluijver, A., Robinson, K., Henry, E.N., Knoll, L.B., Rose, K.C., and C.C. Carey. 2014. Linking the bottom to the top in aquatic ecosystems: mechanisms and stressors of benthic-pelagic coupling, p. 25-47. In P.F. Kemp [ed.], Eco-DAS X Symposium Proceedings, ASLO. DOI: 10.4319/ecodas.2014.978-0-9845591-4-5.25 <Baustian_etal_2014>

2013

Bertilsson, S., A. Burgin, C.C. Carey, S.B. Fey, H.-P. Grossart, L. Grubisic, I. Jones, G. Kirillin, J.T. Lennon, A. Shade, and R.L. Smyth. 2013. The under-ice microbiome of seasonally frozen lakes.  Limnology and Oceanography58:1998-2012. DOI: 10.4319/lo.2013.58.6.1998 <Bertilsson_et_al_UnderIceMicrobes_L&O_2013>

Weathers, K.C., P.C. Hanson, P. Arzberger, J. Brentrup, J. Brookes, C.C. Carey, E. Gaiser, D.P. Hamilton, G.S. Hong, B. Ibelings, E. Jennings, B. Kim, T. Kratz, F.-P. Lin, K. Muraoka, C. O’Reilly, C. Piccolo, K.C. Rose, G. Zhu. The Global Lake Ecological Observatory Network (GLEON): the evolution of grassroots network science. 2013. Limnology and Oceanography Bulletin. 22:71-73. <Weathers_etal_2013_L&O_Bulletin>

2012  

Carey, C.C., H.A. Ewing, K.L. Cottingham, K.C. Weathers, R.Q. Thomas, and J.F. Haney. 2012. Occurrence and toxicity of the cyanobacterium Gloeotrichia echinulata in low-nutrient lakes in the northeastern United States. Aquatic Ecology 46: 395–409 DOI: 10.1007/s10452-012-9409-9 <Carey_2012_Aquat Ecol>

Carey, C.C., B.W. Ibelings, E.P. Hoffman, D.P. Hamilton, and J.D. Brookes.  2012. Eco-physiological adaptations that favour freshwater cyanobacteria in a changing climate. Water Research. 46: 1394-1407. DOI: 10.1016/j.watres.2011.12.016 <Carey_2012_Water Res>

Capps, K.A., C.L. Atkinson, A. Rugenski, C. Baxter, K.S. Boersma, C.C. Carey, P.B. McIntyre, J.W. Moore, W.H. Nowlin, and C.C. Vaughn.  2012. Impacts of species addition and species loss on ecosystem function in freshwater systems.  Bulletin of the Ecological Society of America 93: 402-408. DOI: 10.1890/0012-9623-93.4.402 <Capps_2012_Bulletin of the Ecological Society of America>

Kara, E.L., P.C. Hanson, D.P. Hamilton, M. Hipsey, K.D. McMahon, J.S. Read, L. Winslow, J. Dedrick, K.C. Rose, C.C. Carey, S. Bertilsson, D. da Motta Marques, L. Beversdorf, T. Miller, C. Wu, Y.-F. Hsieh, E. Gaiser, and T.K. Kratz.  2012. Time-scale dependence in numerical simulations: assessment of physical, chemical, and biological predictions in a stratified lake at temporal from scales of hours to months. Environmental Modelling and Software. 35:104-121. DOI: 10.4319/lo.2013.58.6.1998 <Kara_2012_Environmental Modelling and Software>

Carey, C.C., P.C. Hanson, D.A. Bruesewitz, G.W. Holtgrieve, E.L. Kara, K.C. Rose, R.L. Smyth, and K.C. Weathers.  2012. Novel applications of high-frequency sensor data in aquatic ecosystems: discoveries from GLEON, the Global Lake Ecological Observatory Network. Bulletin of the Ecological Society of America.  93: 100-105. DOI: 10.1890/0012-9623-93.1.100  <Carey_2012_Bulletin of the Ecological Society of America>

2011  

Brookes, J.D.* and C.C. Carey*.  2011.  Resilience to blooms.  Science 334: 46-47. DOI: 10.1126/science.1207349 *Both authors contributed equally to this work.

Carey, C.C., and E. Rydin.  2011. Lake trophic status may be determined by the depth distribution of sediment phosphorus.  Limnology and Oceanography 56: 2051-2063. DOI: 10.4319/lo.2011.56.6.2051 <Carey_2011_Limnol Oceanogr>

Carey, C.C., M.P. Ching, S.M. Collins, A.M. Early, W.W. Fetzer, D. Chai, N.G. Hairston, Jr.  2011. Predator-dependent diel migration by Halocaridina rubra shrimp (Malacostraca: Atyidae) in Hawaiian anchialine pools. Aquatic Ecology 45: 35-41. DOI: 10.1007/s10452-010-9321-0 <Carey_2011_Aquat Ecol>

2010   

Carey, C.C. and K. Rengefors.  2010. The cyanobacterium Gloeotrichia echinulata stimulates algal division.  Journal of Plankton Research. 32: 1349-1354. DOI: 10.1093/plankt/fbq046 <Carey_2010_J Plankton Res>

2009   

Shade, A., C.C. Carey, E. Kara, S. Bertilsson, K.D. McMahon, and M.C. Smith.  2009. Can the black box be cracked?  The augmentation of microbial ecology with high-resolution, automated sensing technologies.  ISME Journal 3: 881-888. DOI: 10.1038/ismej.2009.56 <Shade_2009_IsmeJ>

Carey, C.C., Weathers, K.C., and K.L. Cottingham.  2009.  Increases in phosphorus at the sediment-water interface may accelerate the initiation of cyanobacterial blooms in an oligotrophic lake.  Verhandlungen der Internationalen Vereinigung der Limnologie. 30:1185-1188. <Carey_2009_Verh. Internat. Verein. Limnol>

2008    

Carey, C.C., Weathers, K.C., and K.L. Cottingham.  2008.  Gloeotrichia echinulata blooms in an oligotrophic lake:  Helpful insights from eutrophic lakes.  Journal of Plankton Research.  230: 893-904. DOI: 10.1093/plankt/fbn055 <Carey_2008_J Plankton Res>

Benson, B.J., Winslow, L.,  Arzberger, P., Carey, C.C., Fountain, T., Hanson, P.C., Kratz, T.K., and S. Tilak. 2008. Meeting the challenges of an international, grassroots organization of sites deploying sensor networks: the Global Lake Ecological Observatory Network (GLEON). Pages 33-38 in Gries, C. and M.B. Jones, eds. Proceedings of the Environmental Information Management 2008 Conference. <Benson_2008_Proceedings of the Environmental Information Management Conference 2008>

2007    

Carey, C.C., Haney, J.F., and K.L. Cottingham.  2007.  First report of microcystin-LR in Gloeotrichia echinulata.  Environmental Toxicology 22: 337-339.  DOI: 10.1002/tox.20245 <Carey_2007_Environ Toxicol>